Differences

This shows you the differences between two versions of the page.

--- hovedside [2010/09/27 12:13] – lennartfr
+++ hovedside [2020/08/04 13:45] (current) – samuels
@@ Line 1: / Line 1: @@
-====== Admarwiki ======
+====== Computational Biology and Ecology ======
+===== Current Projects =====
 ===== Parsimonious Fish Stock Assessment =====
@@ Line 5: / Line 7: @@
 [[Collaboration:Collaboration|Collaboration]]
-==== In Progress ====
+==== Work done April/May 2010 ====
   * Automatic Differentiation Model Builder ([[admb:admb|ADMB]])
   * [[admb_Synthetic:admb_Synthtetic|ADMB Synthetic Data]]
@@ Line 13: / Line 15: @@
   * [[mfiles:mfiles|Matlab/Octave Utilities]]
-==== New! September 2010 ====
+==== Work done September --- December 2010 ====
+=== Models estimating 0 year olds and older ===
+== Models with assumed exact catch data ==
   * [[admb_real:sdreport_and_vpa|Comparing the models with VPA estimates]]
-  * [[admb_real:two_qs_cohorts_per_run|Designing experiments: Number of cohorts per run]]
+  * [[admb_real:two_qs_cohorts_per_run|Designing experiments: Choosing the number of cohorts per run]]
-    * [[admb_real:monotonizing_surveys|Making survey data monotonic]]
+    * [[admb_real:monotonizing_surveys|Monotonic survey data]]
-  * [[admb_real:uncertain_catch|Models with uncertainties in the catch data]] (**Obsolete**, see below instead)
+== Models with errors in the catch data ==
+  * [[admb_real:uncertain_catch|Model with latent variables]] (**Obsolete**, see below instead)
+=== Model estimating only 3 year olds and older===
+== Models with assumed exact catch data ==
+  * [[admb_real:N3_cohorts_per_run|Choosing the number of cohorts per run]]
+    * [[admb_real:n3_cohorts_per_run_monotonic|Monotonic survey data]] ( :!: **NOTE** The plots in this section contain an error)
+== Models with errors in the catch data ==
+  * [[admb_real:n3_re_catch:catch_sigma_levels:catch_sigma_levels|Testing different levels of sigma for catch --- no variables locked]]
+  * [[admb_real:n3_re_catch:misfit:misfit_testing|Testing of misfit as a function of catch standard deviations (q, s, M locked)]]
+  * [[admb_real:n3_re_catch:locking_variables:locking_tests|Testing the effect of fixing different variables]]
+  * [[admb_real:n3_re_catch:various_experiments|Various experiments]] **(Obsolete)**
-=== Model estimating only 3+ year olds ===
+=== Model following all cohorts in any given year ===
+[[admb_real:all_cohorts:model_description|Description of the model]]
+== Models with assumed exact catch data ==
+  * [[admb_real:all_cohorts:preliminary_experiments|Preliminary experiments]]
+== Models with errors in the catch data ==
+  * TBD
-  * [[admb_real:N3_cohorts_per_run|Number of cohorts per run]]
-    * [[admb_real:n3_cohorts_per_run_monotonic|Monotonic survey data]]